Hardware:

• Offline analysis computers (OA1-5) – on-site and remote access
• Workstations (WS1-5) with high computation power and with available leading-edge Image Analysis software (Amira, Imaris, NIS-Elements AI, Huygens) – remote access only
  • WS5 is dedicated for working with LLS (Lattice light-sheet) data
• To get access to workstations and OA computers remotely, users outside the Faculty of Science at BIOCEV need to contact Dalibor Pánek, dalibor.panek@natur.cuni.cz. Please, provide your BIOCEV user name for access via VPN and/or IP address for direct access from computers at BIOCEV.

Software:

• When using software with limited number of licences on dedicated IMCF computer, reservation of both software license and PC is required.

Data management (OMERO):

OMERO (Open Microscopy Environment) is a powerful platform designed to facilitate the management, sharing, and analysis of microscopy data. Researchers can access OMERO at IMCF through a web interface at omero.natur.biocev.org, making it easy to view and analyze their datasets remotely.

OMERO aligns with the FAIR principles, which stand for Findable, Accessible, Interoperable, and Reusable. By adhering to these principles, OMERO ensures that microscopy data becomes more discoverable and accessible, fostering data sharing and reusability across research communities. The FAIR principles promote open science and contribute to the integrity and transparency of research.